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List navigation |
Home page | TAH partonomy |
Top level | systema nervosum centrale Short Extended |
Level 2 | encephalon Short Extended |
Current level | mesencephalon Short |
Subsidiary language with Latin | |
Non Latin primary language |
Partonomy list |
FMA | TA | UID | ISA |
Short official Latin term
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Short English equivalent
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61993 | 5261 | tax |
mesencephalon
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mesencephalon ; midbrain
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8559 |
morphologia externa mesencephali P4 23 children
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external morphology of mesencephalon
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77488 | 5582 |
lamina quadrigeminalis (par) ; lamina tecti mesencephali (par)
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quadrigeminal plate (pair); tectal plate (pair)
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62403 | 5586 |
colliculus superior (par)
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superior colliculus (pair)
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62404 | 5585 |
colliculus inferior (par)
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inferior colliculus (pair)
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84359 | 5579 |
trigonum lemnisci lateralis (par)
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trigone of lateral lemniscus (pair)
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77801 | 5577 |
sulcus lateralis mesencephali (par)
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lateral groove of mesencephalon (pair)
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62394 | 5575↓ |
pedunculus cerebri (par) ; crus cerebrale (par)
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cerebral peduncle (pair) ; cerebral leg (pair)
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83792 | 5574 | tax |
sulcus nervi oculomotorii (par)
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oculomotor sulcus (pair)
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83740 | 5572 |
fossa interpeduncularis
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interpeduncular fossa
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77523 | 5573 |
substantia perforata posterior
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posterior perforated substance
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8558 |
morphologia interna mesencephali
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internal morphology of mesencephalon
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83902 | 5669 | tax |
tectum mesencephali
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tectum of mesencephalon
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9048 | tax |
substantia grisea tecti mesencephali P4 48 children
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grey substance of tectum of mesencephalon ▲
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8067 | tax |
laminae colliculi superioris (par)
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layers of superior colliculus (pair)
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72406 | 5674 |
stratum zonale (par) ; lamina I colliculi superioris (par)
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zonal layer (pair) ; layer I of superior colliculus (pair)
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72407 | 5675 |
stratum griseum superficiale (par) ; lamina II colliculi superioris (par)
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superficial grey layer (pair) ; layer II of superior colliculus (pair) ▲
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71112 | 5676 |
stratum opticum (par) ; lamina III colliculi superioris (par)
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optic layer (pair) ; layer III of superior colliculus (pair)
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72409 | 5677 |
stratum griseum intermedium (par) ; lamina IV colliculi superioris (par)
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intermediate grey layer (pair) ; layer IV of superior colliculus (pair) ▲
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71113 | 5678 |
stratum medullare intermedium (par) ; lamina V colliculi superioris (par)
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intermediate medullary layer (pair) ; layer V of superior colliculus (pair)
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72410 | 5679 |
stratum griseum profundum (par) ; lamina VI colliculi superioris (par)
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deep grey layer (pair) ; layer VI of superior colliculus (pair) ▲
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72416 | 5680 |
stratum medullare profundum (par) ; lamina VII colliculi superioris (par)
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deep medullary layer (pair) ; layer VII of superior colliculus (pair)
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272347 | 5670 | tax |
nuclei colliculi inferioris (par)
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nuclei of inferior colliculus (pair)
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72413 | 5671 | tax |
nucleus centralis (par)
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central nucleus (pair)
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72412 | 5672↓ | tax |
nucleus externus (par) ; cortex externus colliculi inferioris (par)
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external nucleus (pair) ; external cortex of inferior colliculus (pair)
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72411 | 5673↓ | tax |
nucleus pericentralis (par) ; cortex dorsalis colliculi inferioris (par)
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pericentral nucleus (pair) ; dorsal cortex of inferior colliculus (pair)
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8054 |
stratum I corticis dorsalis (par)
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layer I of dorsal cortex (pair)
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8057 |
stratum II corticis dorsalis (par)
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layer II of dorsal cortex (pair)
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8060 |
stratum III corticis dorsalis (par)
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layer III of dorsal cortex (pair)
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8063 |
stratum IV corticis dorsalis (par)
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layer IV of dorsal cortex (pair)
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9046 | tax |
substantia alba tecti mesencephali P4 25 children
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white matter of tectum of mesencephalon ; white substance of tectum of mesencephalon
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8092 |
tractus commissurales tecti mesencephali (par)
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commissural tracts of tectum of mesencephalon (pair)
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71115 | 5681 | |||||
72418 | 5682 | |||||
8096 |
tractus longi tecti mesencephali (par)
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long tracts of tectum of mesencephalon (pair)
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8100 |
tractus ascendentes medullae spinalis (par)
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ascending tracts of spinal cord (pair)
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77766 | 12531 | tax | ||||
5328 | tax | |||||
8104 |
tractus ascendentes trunci encephali (par)
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ascending tracts of brain stem (pair)
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72417 | 5584 | |||||
71114 | 5583 | |||||
72502 | 5468 | |||||
8108 |
tractus descendentes tecti mesencephali (par)
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descending tracts of tectum of mesencephalon (pair)
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72645 | 8479 | tax | ||||
7503 | ||||||
72620 | 8480 | tax | ||||
7479 |
structurae centrales mesencephali P4 18 children
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central structures of mesencephalon
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7478 |
substantia grisea structurarum centralium mesencephali
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grey matter of central structures of mesencephalon; grey substance of central structures of mesencephalon ▲
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83134 | 5645 |
substantia grisea periaqueductalis ; substantia grisea centralis
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periaqueductal grey matter ; central grey matter ▲
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6302 |
ERR1 (par) ; ERR1 (par)
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dopaminergic cell of periaqueductal grey matters (pair); ERR1 (pair) ▲
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7480 |
substantia alba structurarum centralium mesencephali
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white matter of central structures of mesencephalon; white substance of central structures of mesencephalon
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8043 |
tractus longi structurarum centralium mesencephali (par)
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long tract of central structures of mesencephalons (pair)
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8047 |
tractus ascendentes medullae spinalis (par)
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ascending tracts of spinal cord (pair)
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77766 | 12531 | tax | ||||
5329 | tax | |||||
8051 |
tractus descendentes structurarum centralium mesencephali (par)
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descending tract of central structures of mesencephalons (pair)
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8751 | ||||||
62393 | 5578 | tax |
tegmentum mesencephali
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tegmentum of mesencephalon
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83913 | 5625 | tax |
substantia grisea tegmenti mesencephali P4 170 children
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grey matter of tegmentum of mesencephalon ▲
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8564 | tax |
nuclei somatosensorii tegmenti mesencephali (par)
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somatosensory nuclei of tegmentum of mesencephalon (pair)
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54568 | 5494 | tax |
nucleus mesencephalicus nervi trigeminalis (par)
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mesencephalic nucleus of trigeminal nerve (pair)
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8565 | tax |
nucleus intercollicularis (par)
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intercollicular nucleus (pair)
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8566 | tax |
nuclei visuales tegmenti mesencephali (par)
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visual nuclei of tegmentum of mesencephalon (pair)
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8567 | tax |
nucleus terminalis lateralis (par)
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lateral terminal nucleus (pair)
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9055 | tax |
nuclei acustici tegmenti mesencephali (par) ; nuclei auditorii tegmenti mesencephali (par)
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acoustic nuclei of tegmentum of mesencephalon (pair) ; auditory nuclei of tegmentum of mesencephalon (pair)
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9056 | tax |
nucleus brachii colliculi inferioris (par)
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nucleus of brachium of inferior colliculus (pair)
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77492 | 5652 | tax |
nucleus saguli (par)
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sagulum nucleus (pair)
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77494 | 5653 | tax |
nucleus subbrachialis (par)
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subbrachial nucleus (pair)
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8561 | tax |
nuclei somatomotorii tegmenti mesencephali (par)
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somatomotor nuclei of tegmentum of mesencephalon (pair)
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54510 | 5626 | tax |
nucleus oculomotorius (par)
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oculomotor nucleus (pair) ; nucleus of oculomotor nerve (pair)
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8562 | tax |
nucleus caudalis centralis (par)
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central caudal nucleus (pair)
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8563 | tax |
nucleus interoculomotorius (par)
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interoculomotor nucleus (pair)
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8568 | tax |
nuclei visceromotorii tegmenti mesencephali (par)
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visceromotor nuclei of tegmentum of mesencephalon (pair)
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5627 | tax |
nuclei accessorii nervi oculomotorii (par)
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accessory nuclei of oculomotor nerve (pair)
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8569 | tax |
pars preganglionaris (par)
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preganglionary part (pair)
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8570 | tax |
pars nonganglionaris (par)
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nonganglionary part (pair)
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54524 | 5629 | tax |
nucleus anteromedialis (par)
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anterior medial nucleus (pair)
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5684 | tax |
nuclei reticulares tegmenti mesencephali
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reticular nuclei of tegmentum of mesencephalon
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62402 | 5651 |
formatio reticularis mesencephali (par)
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mesencephalic reticular formation (pair)
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8572 |
nucleus intracuneiformis (par)
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intracuneiform nucleus (pair)
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72427 | 5658 |
nucleus cuneiformis (par)
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cuneiform nucleus (pair)
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8571 |
regio locomotoria mesencephalica (par)
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mesencephalic locomotor region (pair)
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15263 | tax |
nuclei neuromodulatorii tegmenti mesencephali (par)
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neuromodulator nuclei of tegmentum of mesencephalon (pair)
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5663 | tax |
nuclei raphes mesencephali (par) ; cellulae serotonergicae (par)
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raphe nuclei of mesencephalon (pair); serotonergic cells (pair)
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77502 | 5664 |
nucleus raphes linearis (par) ; cellula serotonergica B8 (par)
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linear raphe nucleus (pair); serotonergic cells B8 (pair)
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68462 | 5545 | tax | ||||
7445 | tax |
nuclei dopaminergici (par)
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dopaminergic (pair)
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14773 |
cellulae dopaminergicae areae tegmentalis ventralis (par) ; cellulae dopaminergicae A10 (par)
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dopaminergic cells of ventral tegmental area (pair) ; dopaminergic cells A10 (pair)
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14753 |
cellulae dopaminergicae partis compactae substantiae nigrae (par) ; cellulae dopaminergicae A9 (par)
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dopaminergic cells of compact part of substantia nigra (pair) ; dopaminergic cells A9 (pair)
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14752 |
cellulae dopaminergicae retrorubrae (par) ; cellulae dopaminergicae A8 (par)
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retrored dopaminergic cells (pair) ; dopaminergic cells A8 (pair)
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67947 | 5597 |
substantia nigra (par)
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substantia nigra (pair)
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62907 | 5598↓ |
pars compacta substantiae nigrae (par)
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compact part of substantia nigra (pair)
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8578↓ |
pars dorsalis substantiae nigrae (par) ; pars posterior substantiae nigrae (par)
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dorsal part of substantia nigra (pair) ; posterior part of substantia nigra (pair) ; dorsal tier of substantia nigra (pair)
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8579 |
subnucleus dorsolateralis (par) ; subnucleus posterolateralis (par)
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dorsolateral subnucleus (pair) ; posterolateral subnucleus (pair)
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8580 |
subnucleus dorsomedialis (par) ; subnucleus posteromedialis (par)
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dorsomedial subnucleus (pair) ; posteromedial subnucleus (pair)
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8581 |
pars ventralis substantiae nigrae (par) ; pars anterior substantiae nigrae (par)
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ventral part of substantia nigra (pair) ; anterior part of substantia nigra (pair) ; ventral tier of substantia nigra (pair)
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8582 |
subnucleus ventrolateralis (par) ; subnucleus anterolateralis (par)
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ventrolateral subnucleus (pair) ; anterolateral subnucleus (pair)
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8583 |
subnucleus ventrointermedius (par) ; subnucleus anterointermedius (par)
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ventrointermediate subnucleus (pair) ; anterointermediate subnucleus (pair)
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8584 |
subnucleus ventromedialis (par) ; subnucleus anteromedialis (par)
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ventromedial subnucleus (pair) ; anteromedial subnucleus (pair)
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76844 | 5599 |
pars lateralis substantiae nigrae (par)
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lateral part of substantia nigra (pair)
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8585 |
pars medialis substantiae nigrae (par)
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medial part of substantia nigra (pair)
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62908 | 5600 |
pars reticulata substantiae nigrae (par)
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reticular part of substantia nigra (pair)
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12250 |
area tegmentalis ventralis (par) ; area tegmentalis anterior (par)
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ventral tegmental area (pair) ; anterior tegmental area (pair)
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5654 | tax |
nuclei tegmentales ventrales mesencephali (par) ; nuclei tegmentales anteriores mesencephali (par)
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ventral tegmental nuclei of mesencephalon (pair) ; anterior tegmental nuclei of mesencephalon (pair)
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8586 |
nucleus linearis rostralis (par) ; nucleus linearis superior (par)
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rostral linear nucleus (pair) ; superior linear nucleus (pair)
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8587 |
nucleus linearis caudalis (par) ; nucleus linearis inferior (par)
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caudal linear nucleus (pair) ; inferior linear nucleus (pair)
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77495 | 5655 |
nucleus interfascicularis (par)
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interfascicular nucleus (pair)
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77497 | 5657 |
nucleus paranigralis (par)
|
paranigral nucleus (pair)
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77496 | 5656 |
nucleus parabrachialis pigmentosus (par)
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pigmented parabrachial nucleus (pair)
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84341 | 5685 |
nucleus parapeduncularis (par)
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parapeduncular nucleus (pair)
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8589 | tax |
nuclei limbici tegmenti mesencephali (par)
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limbic nuclei of tegmentum of mesencephalon (pair)
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72437 | 5646 | tax |
nucleus peripeduncularis (par)
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peripeduncular nucleus (pair)
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8590 | tax |
nuclei precerebellares tegmenti mesencephali (par)
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precerebellar nuclei of tegmentum of mesencephalon (pair)
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62407 | 5647 | tax |
nucleus ruber (par)
|
red nucleus (pair)
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72431 | 5648 | tax |
pars magnocellularis (par)
|
magnocellular part (pair)
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72430 | 5649 | tax |
pars parvocellularis (par)
|
parvocellular part (pair)
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77493 | 5650 | tax |
pars posteromedialis (par) ; pars dorsomedialis (par)
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posteromedial part (pair) ; dorsomedial part (pair)
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83937 | 5602 |
substantia alba tegmenti mesencephali P4 50 children
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white matter of tegmentum of mesencephalon ; white substance of tegmentum of mesencephalon
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7464 |
radices centrales tegmenti mesencephali (par)
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central roots of tegmentum of mesencephalon (pair)
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72489 | 5464 | |||||
9066 |
tractus longi tegmenti mesencephali (par)
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long tracts of tegmentum of mesencephalon (pair)
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9067 |
tractus ascendentes medullae spinalis (par)
|
ascending tracts of spinal cord (pair)
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||||
77766 | 12531 | tax | ||||
5327 | tax | |||||
7956 | ||||||
8594 |
tractus ascendentes trunci encephali (par)
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ascending tracts of brain stem (pair)
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8485 | tax | |||||
72502 | 5468 | |||||
7460↓ | ||||||
8427 | ||||||
8428 | ||||||
8429 | ||||||
8430↓ | ||||||
83852 | 8426↓ | |||||
12170 | ||||||
72500 | 5463 | |||||
5462 | ||||||
8603 |
tractus efferentes cerebelli (par)
|
efferent tracts of cerebellum (pair)
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||||
72495 | 5760 | tax | ||||
12256 |
tractus afferentes telencephali (par)
|
afferent tracts of telencephalon (pair)
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||||
8118 | ||||||
8122 | ||||||
8605 |
tractus descendentes (par)
|
descending tracts (pair)
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||||
8126 | ||||||
77482 | 8415 | tax | ||||
72640 | 8481 | tax | ||||
72452 | 5623 | |||||
7930 | ||||||
77031 | 8494 | tax | ||||
8490 | tax | |||||
75216 | 8491 | tax | ||||
75219 | 8492 | tax | ||||
83850 | 5476 | tax | ||||
77050 | 5322 | tax | ||||
8035 |
substantia alba pedunculi cerebri (par) P4 8 children
|
white matter of cerebral peduncle (pair) ; white substance of cerebral peduncle (pair)
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||||
72634 | 8526 | tax | ||||
5624 | tax | |||||
9196 | tax | |||||
224856 | 12543 | |||||
75223 | 6243 | |||||
8533 | ||||||
161 lines
|
|
|||||
65.8 %
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60.2 %
|
Scientific notes |
UID |
Libelle of note
|
5575 |
Traditionally, the Mesencephalon was subdivided into the Tectum (the Colliculi) and the Pedunculus (the Crus cerebri, the Substantia.VTA complex and the Tegmentum mesencephali). Here it is advocated to use the term Pedunculus only for what it actually is: a large bundle of fibres from the Telencephalon to the Brain stem and Spinal cord.
|
5598 |
The Pars compacta may be further subdivided into two parts or tiers, each with subnuclei (Braak H, Braak E 1986 Nuclear configuration and neuronal types of the nucleus niger in the brain of the human adult. Human Neurobiol 5:71-82; van Domburg PHMF, ten Donkelaar HJ 1991 The human substantia nigra and ventral tegmental area. Adv Anat Embryol Cell Biol 121:1-130); here, the subdivision by Halliday G, Reyes S, Double K (2012 Substantia nigra, ventral tegmental area and retrorubral fields. In: Mai JK, Paxinos G, eds: The Human Nervous System, 3rd ed. Elsevier, Amsterdam, pp 439-455) is used. The various subnuclei partly correspond to the subdivision into Nigrosomes and Matrix (Damier P, Hirsch EC, Agid Y, Graybiel AM 1999 The substantia nigra of the human brain. I. Nigrosomes and the nigral matrix, a compartmental organization based on calbindin D28k immunohistochemistry. Brain 122:1421-1436).
|
5672 |
The Nucleus externus is a laminar structure; in Amunts K, Morosan P, Hilbig H, Zilles K (2012 Auditory system. In: Mai JK, Paxinos G, eds: The Human Nervous System, 3rd ed. Elsevier, Amsterdam, pp 1270-1300) described as External cortex of Inferior colliculus (ECIC) to replace the TA term Nucleus lateralis. In TH, the Nucleus pericentralis is described as Dorsal cortex with Layers I-IV, based on: Geniec P, Morest DK (1971) The neuronal architecture of the human posterior colliculus; Acta Oto-Laryngol 295:(Suppl):1-33; supported by immunohistochemical data in rhesus monkeys by Amunts et al. (2012; their Dorsal cortex of inferior colliculus).
|
5673 |
See note # 5672
|
7460 |
The Tractus vestibulomesencephalici include (Büttner-Ennever JA, Gerrits NM 2004 Vestibular system. In: Paxinos G, Mai JK, eds. The Human Nervous System, 2nd ed. Elsevier, Amsterdam, pp 1213-1240): the Tractus vestibulomesencephalicus medialis, containing fibres from Vestibular nuclei to Oculomotor nuclei, passing via the MLF; the Tractus vestibulomesencephalicus lateralis, with fibres from the Lateral vestibular nucleus to Oculomotor nuclei, passing just lateral to the MLF (eponym: Ascending tract of Deiters; the Tractus vestibulomesencephalicus ventralis, with fibres from the Y group and the Superior vestibular nucleus crossing in the Ventral tegmentum either within or below the Brachium conjunctivum.
|
8426 |
(Tractus trigeminothalamici): The Tractus trigeminothalamicus anterior arises in the Spinal trigeminal nucleus and joins the Medial lemniscus, whereas the Tractus trigeminothalamicus lateralis arises in the Caudal part of the Spinal trigeminal nucleus and joins the Anterolateral tract.
|
8430 |
(Tractus vestibulothalamicus): In monkeys, Vestibulothalamic projections pass via both the FLM and the Ascending tract of Deiters (Lang W, Büttner-Ennever JA, Büttner U 1979 Vestibular projections to the monkey thalamus: An autoradiographic study. Brain Res 177:3-17). Zwergal et al. (2008) demonstrated a Vestibulothalamic tract adjacent to the Medial lemniscus in humans (Zwergal A, Büttner-Ennever JA, Brandt T, Strupp M 2008 An ipsilateral vestibulothalamic tract adjacent to the medial lemniscus in humans. Brain 131:2928-2935).
|
8578 |
The two 'Olfactory gyri' in TA suggested their presence as clearly identifiable structures; this is not true. These terms remained from the classic description of the Rhinencephalon (see Gastaut H, Lammers HJ 1961 Anatomie du rhinencéphale. Masson, Paris) and have been deleted. The Cortex piriformis or Cortex olfactorius primarius is the real Olfactory cortex, and can be divided into Frontal and Temporal parts (Allison AC 1954 The secondary olfactory areas in the human brain. J Anat (Lond) 88:481-488; Heimer L, de Olmos J, Alheid GF, et al. 1999 The human basal forebrain, Part 2. Handb Chem Neuroanat 15:57-226).
|
Signature |
Type of list | P3F |
List Unit Identifier | 5261 |
Sublist 1 | 5602 substantia alba tegmenti mesencephali 50/37 on 8.4.2019 |
Sublist 2 | 5625 substantia grisea tegmenti mesencephali 170/59 on 8.4.2019 |
Sublist 3 | 7479 structura centralis mesencephali 18/11 on 18.4.2018 |
Sublist 4 | 8035 substantia alba pedunculi cerebri 8/7 on 18.4.2018 |
Sublist 5 | 8559 morphologia externa mesencephali 23/10 on 29.3.2019 |
Sublist 6 | 9046 substantia alba tecti mesencephali 25/16 on 18.4.2018 |
Sublist 7 | 9048 substantia grisea tecti mesencephali 48/17 on 18.4.2018 |
Subtotals | subchildren 342 subunits 157 |
Proper children | 10 |
Number of children | 352 (validated) |
Proper units | 4 |
Number of units | 161 (validated) |
Signature | 4749 (validated since 8.4.2019) |
Date: 29.07.2024 |